Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr3Q9DCF9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr3Q9DCF9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr3Q9DCF9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr3Q9DCF9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr3Q9DCF9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr3Q9DCF9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr3Q9DCF9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr3Q9DCF9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr3Q9DCF9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr3Q9DCF9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr3Q9DCF9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr3Q9DCF9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Smad6-203ENSMUST00000179458 273 ntBASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr3Q9DCF9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssr3Q9DCF9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Gm43137-201ENSMUST00000198052 594 ntBASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ssr3Q9DCF9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ssr3Q9DCF9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ssr3Q9DCF9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Ssr3Q9DCF9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms