Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssmem1Q9D9Y8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Gm21814-202ENSMUST00000203277 873 ntBASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssmem1Q9D9Y8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssmem1Q9D9Y8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ssmem1Q9D9Y8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ssmem1Q9D9Y8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssmem1Q9D9Y8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Gm5417-201ENSMUST00000079706 384 ntBASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssmem1Q9D9Y8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms