Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sh2d4aQ9D7V1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.93■□□□□ 0.3
Sh2d4aQ9D7V1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh2d4aQ9D7V1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh2d4aQ9D7V1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh2d4aQ9D7V1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh2d4aQ9D7V1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.93■□□□□ 0.3
Sh2d4aQ9D7V1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.93■□□□□ 0.3
Sh2d4aQ9D7V1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh2d4aQ9D7V1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh2d4aQ9D7V1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sh2d4aQ9D7V1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh2d4aQ9D7V1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh2d4aQ9D7V1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sh2d4aQ9D7V1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sh2d4aQ9D7V1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Gm7514-201ENSMUST00000209475 934 ntBASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sh2d4aQ9D7V1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Gm10033-202ENSMUST00000211874 928 ntBASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sh2d4aQ9D7V1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sh2d4aQ9D7V1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sh2d4aQ9D7V1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.89■□□□□ 0.3
Sh2d4aQ9D7V1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Sh2d4aQ9D7V1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms