Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.2■□□□□ 0.66
Snx29Q9D3S3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.2■□□□□ 0.66
Snx29Q9D3S3 Gm17807-201ENSMUST00000186869 298 ntBASIC19.2■□□□□ 0.66
Snx29Q9D3S3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.2■□□□□ 0.66
Snx29Q9D3S3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Snx29Q9D3S3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx29Q9D3S3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Snx29Q9D3S3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx29Q9D3S3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Snx29Q9D3S3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx29Q9D3S3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Snx29Q9D3S3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx29Q9D3S3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Snx29Q9D3S3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx29Q9D3S3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx29Q9D3S3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx29Q9D3S3 Gm18958-201ENSMUST00000174258 762 ntBASIC19.19■□□□□ 0.66
Snx29Q9D3S3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx29Q9D3S3 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.19■□□□□ 0.66
Snx29Q9D3S3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx29Q9D3S3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx29Q9D3S3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Snx29Q9D3S3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Gm17971-201ENSMUST00000190239 806 ntBASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx29Q9D3S3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Snx29Q9D3S3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx29Q9D3S3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.16■□□□□ 0.66
Snx29Q9D3S3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Snx29Q9D3S3 Fst-202ENSMUST00000223640 2612 ntBASIC19.16■□□□□ 0.66
Snx29Q9D3S3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Snx29Q9D3S3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx29Q9D3S3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snx29Q9D3S3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Snx29Q9D3S3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Snx29Q9D3S3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx29Q9D3S3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx29Q9D3S3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.16■□□□□ 0.66
Snx29Q9D3S3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Snx29Q9D3S3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx29Q9D3S3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx29Q9D3S3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.16■□□□□ 0.66
Snx29Q9D3S3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Snx29Q9D3S3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx29Q9D3S3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Snx29Q9D3S3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx29Q9D3S3 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.15■□□□□ 0.66
Snx29Q9D3S3 Gm28033-201ENSMUST00000184224 96 ntBASIC19.15■□□□□ 0.66
Snx29Q9D3S3 Gm37722-201ENSMUST00000193757 208 ntBASIC19.15■□□□□ 0.66
Snx29Q9D3S3 Gm18669-201ENSMUST00000216049 778 ntBASIC19.15■□□□□ 0.66
Snx29Q9D3S3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx29Q9D3S3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx29Q9D3S3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx29Q9D3S3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx29Q9D3S3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Snx29Q9D3S3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.15■□□□□ 0.66
Snx29Q9D3S3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.15■□□□□ 0.66
Snx29Q9D3S3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Snx29Q9D3S3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Snx29Q9D3S3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Snx29Q9D3S3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Snx29Q9D3S3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms