Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.3■□□□□ 0.68
Q9CYI0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.3■□□□□ 0.68
Q9CYI0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CYI0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CYI0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CYI0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CYI0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CYI0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CYI0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CYI0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q9CYI0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Q9CYI0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Q9CYI0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q9CYI0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Q9CYI0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.29■□□□□ 0.68
Q9CYI0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q9CYI0 Gm7889-201ENSMUST00000185591 958 ntBASIC19.29■□□□□ 0.68
Q9CYI0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.29■□□□□ 0.68
Q9CYI0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Q9CYI0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q9CYI0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q9CYI0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q9CYI0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q9CYI0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.28■□□□□ 0.68
Q9CYI0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Q9CYI0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q9CYI0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q9CYI0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q9CYI0 Gm12085-201ENSMUST00000119263 940 ntBASIC19.28■□□□□ 0.68
Q9CYI0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.28■□□□□ 0.68
Q9CYI0 Gm27463-201ENSMUST00000183569 57 ntBASIC19.28■□□□□ 0.68
Q9CYI0 Gm38027-201ENSMUST00000192315 235 ntBASIC19.28■□□□□ 0.68
Q9CYI0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Q9CYI0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Q9CYI0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Q9CYI0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Q9CYI0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Q9CYI0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.27■□□□□ 0.68
Q9CYI0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q9CYI0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Q9CYI0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q9CYI0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q9CYI0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Q9CYI0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Q9CYI0 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.27■□□□□ 0.68
Q9CYI0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.27■□□□□ 0.68
Q9CYI0 Gm4974-201ENSMUST00000209974 875 ntBASIC19.27■□□□□ 0.68
Q9CYI0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Q9CYI0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Q9CYI0 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.27■□□□□ 0.68
Q9CYI0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q9CYI0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q9CYI0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.27■□□□□ 0.68
Q9CYI0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Q9CYI0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Q9CYI0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Q9CYI0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CYI0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CYI0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CYI0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CYI0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.26■□□□□ 0.67
Q9CYI0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Q9CYI0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Q9CYI0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.26■□□□□ 0.67
Q9CYI0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.26■□□□□ 0.67
Q9CYI0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CYI0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CYI0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CYI0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CYI0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CYI0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CYI0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q9CYI0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q9CYI0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q9CYI0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Q9CYI0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q9CYI0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q9CYI0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q9CYI0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q9CYI0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q9CYI0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Q9CYI0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q9CYI0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Q9CYI0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.25■□□□□ 0.67
Q9CYI0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.25■□□□□ 0.67
Q9CYI0 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.25■□□□□ 0.67
Q9CYI0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Q9CYI0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q9CYI0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Q9CYI0 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.24■□□□□ 0.67
Q9CYI0 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.24■□□□□ 0.67
Q9CYI0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q9CYI0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Q9CYI0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q9CYI0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q9CYI0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Q9CYI0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.24■□□□□ 0.67
Q9CYI0 Mir8112-201ENSMUST00000184382 131 ntBASIC19.24■□□□□ 0.67
Q9CYI0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.24■□□□□ 0.67
Q9CYI0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms