Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssu72Q9CY97 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssu72Q9CY97 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssu72Q9CY97 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssu72Q9CY97 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssu72Q9CY97 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.37■□□□□ 0.37
Ssu72Q9CY97 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Ssu72Q9CY97 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
Ssu72Q9CY97 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.37■□□□□ 0.37
Ssu72Q9CY97 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.37■□□□□ 0.37
Ssu72Q9CY97 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ssu72Q9CY97 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.37■□□□□ 0.37
Ssu72Q9CY97 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssu72Q9CY97 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Gm42778-201ENSMUST00000199644 553 ntBASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Zfp783-201ENSMUST00000095946 670 ntBASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ssu72Q9CY97 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssu72Q9CY97 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Mir2861-201ENSMUST00000175539 82 ntBASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssu72Q9CY97 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ssu72Q9CY97 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssu72Q9CY97 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Ssu72Q9CY97 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssu72Q9CY97 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssu72Q9CY97 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssu72Q9CY97 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.33■□□□□ 0.36
Ssu72Q9CY97 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssu72Q9CY97 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ssu72Q9CY97 Gm7514-201ENSMUST00000209475 934 ntBASIC17.33■□□□□ 0.36
Ssu72Q9CY97 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.33■□□□□ 0.36
Ssu72Q9CY97 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssu72Q9CY97 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssu72Q9CY97 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssu72Q9CY97 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Ssu72Q9CY97 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssu72Q9CY97 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssu72Q9CY97 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssu72Q9CY97 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ssu72Q9CY97 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssu72Q9CY97 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssu72Q9CY97 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssu72Q9CY97 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssu72Q9CY97 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.32■□□□□ 0.36
Ssu72Q9CY97 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms