Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Gm8495-201ENSMUST00000188740 694 ntBASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ssr1Q9CY50 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Gm6211-202ENSMUST00000167849 925 ntBASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ssr1Q9CY50 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.91■□□□□ 0.62
Ssr1Q9CY50 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.9■□□□□ 0.62
Ssr1Q9CY50 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ssr1Q9CY50 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ssr1Q9CY50 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.9■□□□□ 0.62
Ssr1Q9CY50 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ssr1Q9CY50 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ssr1Q9CY50 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ssr1Q9CY50 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ssr1Q9CY50 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ssr1Q9CY50 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.9■□□□□ 0.62
Ssr1Q9CY50 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ssr1Q9CY50 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ssr1Q9CY50 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ssr1Q9CY50 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ssr1Q9CY50 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ssr1Q9CY50 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ssr1Q9CY50 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Gm7290-201ENSMUST00000104990 617 ntBASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Gm12918-201ENSMUST00000120234 636 ntBASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Gm15710-201ENSMUST00000121821 636 ntBASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Gm5075-201ENSMUST00000196916 622 ntBASIC18.88■□□□□ 0.61
Ssr1Q9CY50 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ssr1Q9CY50 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms