Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm7Q9CQQ8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lsm7Q9CQQ8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Gm24841-201ENSMUST00000158676 357 ntBASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lsm7Q9CQQ8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Gm7889-201ENSMUST00000185591 958 ntBASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm7Q9CQQ8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Lsm7Q9CQQ8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm7Q9CQQ8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm7Q9CQQ8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm7Q9CQQ8 Gm7977-201ENSMUST00000193787 748 ntBASIC17.66■□□□□ 0.42
Lsm7Q9CQQ8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.66■□□□□ 0.42
Lsm7Q9CQQ8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm7Q9CQQ8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Lsm7Q9CQQ8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm7Q9CQQ8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm7Q9CQQ8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm7Q9CQQ8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lsm7Q9CQQ8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm7Q9CQQ8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Lsm7Q9CQQ8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Lsm7Q9CQQ8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lsm7Q9CQQ8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lsm7Q9CQQ8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
Lsm7Q9CQQ8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.64■□□□□ 0.42
Lsm7Q9CQQ8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms