Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 Fst-202ENSMUST00000223640 2612 ntBASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 Gm5417-201ENSMUST00000079706 384 ntBASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.96■□□□□ 0.47
Gtf2ird2Q99NI3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Gtf2ird2Q99NI3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gtf2ird2Q99NI3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Gm3375-201ENSMUST00000203929 796 ntBASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gtf2ird2Q99NI3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gtf2ird2Q99NI3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Mir7071-201ENSMUST00000184847 69 ntBASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.92■□□□□ 0.46
Gtf2ird2Q99NI3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms