Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 Gm11927-201ENSMUST00000118472 759 ntBASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 Mir2861-201ENSMUST00000175539 82 ntBASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smtnl1Q99LM3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smtnl1Q99LM3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smtnl1Q99LM3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smtnl1Q99LM3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Smtnl1Q99LM3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smtnl1Q99LM3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smtnl1Q99LM3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smtnl1Q99LM3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smtnl1Q99LM3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smtnl1Q99LM3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smtnl1Q99LM3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smtnl1Q99LM3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smtnl1Q99LM3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smtnl1Q99LM3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smtnl1Q99LM3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Smtnl1Q99LM3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smtnl1Q99LM3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 Gm5408-201ENSMUST00000197998 747 ntBASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smtnl1Q99LM3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Smtnl1Q99LM3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Smtnl1Q99LM3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.13■□□□□ 0.65
Smtnl1Q99LM3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.13■□□□□ 0.65
Smtnl1Q99LM3 Mir6349-201ENSMUST00000184059 97 ntBASIC19.13■□□□□ 0.65
Smtnl1Q99LM3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.13■□□□□ 0.65
Smtnl1Q99LM3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smtnl1Q99LM3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smtnl1Q99LM3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smtnl1Q99LM3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smtnl1Q99LM3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smtnl1Q99LM3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smtnl1Q99LM3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smtnl1Q99LM3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smtnl1Q99LM3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms