Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Hps4Q99KG7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hps4Q99KG7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Hps4Q99KG7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hps4Q99KG7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Hps4Q99KG7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hps4Q99KG7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hps4Q99KG7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hps4Q99KG7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Grk6-206ENSMUST00000224995 2971 ntBASIC20.53■□□□□ 0.88
Hps4Q99KG7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hps4Q99KG7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.52■□□□□ 0.88
Hps4Q99KG7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Gm21559-201ENSMUST00000220638 855 ntBASIC20.52■□□□□ 0.88
Hps4Q99KG7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Gm8587-201ENSMUST00000076538 843 ntBASIC20.52■□□□□ 0.88
Hps4Q99KG7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Hps4Q99KG7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hps4Q99KG7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hps4Q99KG7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hps4Q99KG7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hps4Q99KG7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hps4Q99KG7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.51■□□□□ 0.87
Hps4Q99KG7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Hps4Q99KG7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hps4Q99KG7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hps4Q99KG7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hps4Q99KG7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hps4Q99KG7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hps4Q99KG7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hps4Q99KG7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hps4Q99KG7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
Hps4Q99KG7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.5■□□□□ 0.87
Hps4Q99KG7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
Hps4Q99KG7 Gm25016-201ENSMUST00000158399 131 ntBASIC20.5■□□□□ 0.87
Hps4Q99KG7 Gm17661-201ENSMUST00000170317 270 ntBASIC20.5■□□□□ 0.87
Hps4Q99KG7 Gm27389-201ENSMUST00000183622 195 ntBASIC20.5■□□□□ 0.87
Hps4Q99KG7 Mir1668-201ENSMUST00000184114 107 ntBASIC20.5■□□□□ 0.87
Hps4Q99KG7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.5■□□□□ 0.87
Hps4Q99KG7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Hps4Q99KG7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hps4Q99KG7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hps4Q99KG7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hps4Q99KG7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hps4Q99KG7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hps4Q99KG7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hps4Q99KG7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Hps4Q99KG7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hps4Q99KG7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hps4Q99KG7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Hps4Q99KG7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Hps4Q99KG7 Gm7213-201ENSMUST00000215977 950 ntBASIC20.49■□□□□ 0.87
Hps4Q99KG7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hps4Q99KG7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Hps4Q99KG7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Hps4Q99KG7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hps4Q99KG7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hps4Q99KG7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Hps4Q99KG7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hps4Q99KG7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hps4Q99KG7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.48■□□□□ 0.87
Hps4Q99KG7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hps4Q99KG7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Hps4Q99KG7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Hps4Q99KG7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hps4Q99KG7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hps4Q99KG7 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms