Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc1bQ920F6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Gm45058-201ENSMUST00000205810 766 ntBASIC20.12■□□□□ 0.81
Smc1bQ920F6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smc1bQ920F6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc1bQ920F6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc1bQ920F6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc1bQ920F6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Smc1bQ920F6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc1bQ920F6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc1bQ920F6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc1bQ920F6 Gm14859-201ENSMUST00000117752 357 ntBASIC20.11■□□□□ 0.81
Smc1bQ920F6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Smc1bQ920F6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
Smc1bQ920F6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc1bQ920F6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smc1bQ920F6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc1bQ920F6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc1bQ920F6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smc1bQ920F6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Smc1bQ920F6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc1bQ920F6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc1bQ920F6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Smc1bQ920F6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc1bQ920F6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc1bQ920F6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc1bQ920F6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Smc1bQ920F6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc1bQ920F6 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.1■□□□□ 0.81
Smc1bQ920F6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc1bQ920F6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smc1bQ920F6 Gm18101-201ENSMUST00000215769 548 ntBASIC20.1■□□□□ 0.81
Smc1bQ920F6 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.1■□□□□ 0.81
Smc1bQ920F6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc1bQ920F6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc1bQ920F6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc1bQ920F6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc1bQ920F6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smc1bQ920F6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Smc1bQ920F6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smc1bQ920F6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Smc1bQ920F6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc1bQ920F6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smc1bQ920F6 Ank2-226ENSMUST00000189368 339 ntBASIC20.09■□□□□ 0.81
Smc1bQ920F6 Gm38285-201ENSMUST00000192928 922 ntBASIC20.09■□□□□ 0.81
Smc1bQ920F6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc1bQ920F6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smc1bQ920F6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc1bQ920F6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Smc1bQ920F6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smc1bQ920F6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc1bQ920F6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc1bQ920F6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc1bQ920F6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc1bQ920F6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc1bQ920F6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smc1bQ920F6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc1bQ920F6 Mir6349-201ENSMUST00000184059 97 ntBASIC20.08■□□□□ 0.81
Smc1bQ920F6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smc1bQ920F6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.08■□□□□ 0.81
Smc1bQ920F6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc1bQ920F6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc1bQ920F6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc1bQ920F6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc1bQ920F6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Smc1bQ920F6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Smc1bQ920F6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc1bQ920F6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc1bQ920F6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smc1bQ920F6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smc1bQ920F6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc1bQ920F6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc1bQ920F6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc1bQ920F6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc1bQ920F6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Smc1bQ920F6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc1bQ920F6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Smc1bQ920F6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc1bQ920F6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Smc1bQ920F6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.07■□□□□ 0.8
Smc1bQ920F6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smc1bQ920F6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smc1bQ920F6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms