Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Pcdha3Q91Y16 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Gm11643-201ENSMUST00000119578 864 ntBASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Gm12382-201ENSMUST00000122005 922 ntBASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdha3Q91Y16 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Gm42545-201ENSMUST00000202755 922 ntBASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdha3Q91Y16 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Gm43183-201ENSMUST00000200632 547 ntBASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdha3Q91Y16 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha3Q91Y16 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha3Q91Y16 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.21■□□□□ 0.51
Pcdha3Q91Y16 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha3Q91Y16 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha3Q91Y16 Mir1199-201ENSMUST00000117015 119 ntBASIC18.21■□□□□ 0.51
Pcdha3Q91Y16 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdha3Q91Y16 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha3Q91Y16 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha3Q91Y16 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha3Q91Y16 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha3Q91Y16 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha3Q91Y16 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcdha3Q91Y16 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdha3Q91Y16 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms