Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb6Q91XZ4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb6Q91XZ4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb6Q91XZ4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb6Q91XZ4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb6Q91XZ4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb6Q91XZ4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Pcdhb6Q91XZ4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb6Q91XZ4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb6Q91XZ4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb6Q91XZ4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb6Q91XZ4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb6Q91XZ4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb6Q91XZ4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb6Q91XZ4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb6Q91XZ4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb6Q91XZ4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb6Q91XZ4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb6Q91XZ4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.96■□□□□ 0.47
Pcdhb6Q91XZ4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.96■□□□□ 0.47
Pcdhb6Q91XZ4 Gm4974-201ENSMUST00000209974 875 ntBASIC17.96■□□□□ 0.47
Pcdhb6Q91XZ4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb6Q91XZ4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb6Q91XZ4 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.96■□□□□ 0.47
Pcdhb6Q91XZ4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb6Q91XZ4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb6Q91XZ4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Pcdhb6Q91XZ4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Pcdhb6Q91XZ4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb6Q91XZ4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb6Q91XZ4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 Gm10517-202ENSMUST00000192970 758 ntBASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb6Q91XZ4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.92■□□□□ 0.46
Pcdhb6Q91XZ4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb6Q91XZ4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Pcdhb6Q91XZ4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhb6Q91XZ4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhb6Q91XZ4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb6Q91XZ4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms