Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhgc5Q91XW9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Pcdhgc5Q91XW9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pcdhgc5Q91XW9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Mir6349-201ENSMUST00000184059 97 ntBASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Gm33142-201ENSMUST00000193913 867 ntBASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhgc5Q91XW9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc5Q91XW9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc5Q91XW9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc5Q91XW9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc5Q91XW9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.88■□□□□ 0.77
Pcdhgc5Q91XW9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdhgc5Q91XW9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Pcdhgc5Q91XW9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc5Q91XW9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc5Q91XW9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc5Q91XW9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc5Q91XW9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc5Q91XW9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc5Q91XW9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhgc5Q91XW9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.87■□□□□ 0.77
Pcdhgc5Q91XW9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.86■□□□□ 0.77
Pcdhgc5Q91XW9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc5Q91XW9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc5Q91XW9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Pcdhgc5Q91XW9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Pcdhgc5Q91XW9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc5Q91XW9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc5Q91XW9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.86■□□□□ 0.77
Pcdhgc5Q91XW9 Gm45058-201ENSMUST00000205810 766 ntBASIC19.86■□□□□ 0.77
Pcdhgc5Q91XW9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc5Q91XW9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdhgc5Q91XW9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc5Q91XW9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc5Q91XW9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhgc5Q91XW9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgc5Q91XW9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgc5Q91XW9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdhgc5Q91XW9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgc5Q91XW9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgc5Q91XW9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Pcdhgc5Q91XW9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgc5Q91XW9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pcdhgc5Q91XW9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgc5Q91XW9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgc5Q91XW9 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.85■□□□□ 0.77
Pcdhgc5Q91XW9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgc5Q91XW9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgc5Q91XW9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgc5Q91XW9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhgc5Q91XW9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.84■□□□□ 0.77
Pcdhgc5Q91XW9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgc5Q91XW9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgc5Q91XW9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhgc5Q91XW9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.84■□□□□ 0.77
Pcdhgc5Q91XW9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgc5Q91XW9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Pcdhgc5Q91XW9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Pcdhgc5Q91XW9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgc5Q91XW9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgc5Q91XW9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgc5Q91XW9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhgc5Q91XW9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms