Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tram1Q91V04 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tram1Q91V04 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Tram1Q91V04 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Tram1Q91V04 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tram1Q91V04 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.07■□□□□ 0
Tram1Q91V04 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.07■□□□□ 0
Tram1Q91V04 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.07■□□□□ 0
Tram1Q91V04 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tram1Q91V04 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tram1Q91V04 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tram1Q91V04 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tram1Q91V04 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tram1Q91V04 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tram1Q91V04 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.07■□□□□ 0
Tram1Q91V04 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tram1Q91V04 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tram1Q91V04 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.06■□□□□ 0
Tram1Q91V04 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tram1Q91V04 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tram1Q91V04 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tram1Q91V04 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Tram1Q91V04 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tram1Q91V04 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tram1Q91V04 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tram1Q91V04 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Tram1Q91V04 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tram1Q91V04 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tram1Q91V04 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tram1Q91V04 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.06■□□□□ 0
Tram1Q91V04 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tram1Q91V04 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tram1Q91V04 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tram1Q91V04 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tram1Q91V04 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.06■□□□□ 0
Tram1Q91V04 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.06■□□□□ 0
Tram1Q91V04 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Tram1Q91V04 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Tram1Q91V04 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Tram1Q91V04 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tram1Q91V04 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tram1Q91V04 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.05■□□□□ -0
Tram1Q91V04 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tram1Q91V04 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.05■□□□□ -0
Tram1Q91V04 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tram1Q91V04 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tram1Q91V04 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tram1Q91V04 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tram1Q91V04 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.05■□□□□ -0
Tram1Q91V04 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.05■□□□□ -0
Tram1Q91V04 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tram1Q91V04 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Tram1Q91V04 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tram1Q91V04 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Tram1Q91V04 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Tram1Q91V04 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Tram1Q91V04 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Tram1Q91V04 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Tram1Q91V04 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Tram1Q91V04 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tram1Q91V04 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tram1Q91V04 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tram1Q91V04 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.04■□□□□ -0
Tram1Q91V04 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tram1Q91V04 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tram1Q91V04 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Tram1Q91V04 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Tram1Q91V04 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tram1Q91V04 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Tram1Q91V04 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tram1Q91V04 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.04■□□□□ -0
Tram1Q91V04 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tram1Q91V04 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.04■□□□□ -0
Tram1Q91V04 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tram1Q91V04 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Tram1Q91V04 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.04■□□□□ -0
Tram1Q91V04 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tram1Q91V04 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.04■□□□□ -0
Tram1Q91V04 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tram1Q91V04 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tram1Q91V04 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tram1Q91V04 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tram1Q91V04 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Tram1Q91V04 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tram1Q91V04 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.03■□□□□ -0
Tram1Q91V04 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tram1Q91V04 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tram1Q91V04 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Tram1Q91V04 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.03■□□□□ -0
Tram1Q91V04 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tram1Q91V04 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.03■□□□□ -0
Tram1Q91V04 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.03■□□□□ -0
Tram1Q91V04 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tram1Q91V04 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tram1Q91V04 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Tram1Q91V04 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tram1Q91V04 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tram1Q91V04 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tram1Q91V04 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.03■□□□□ -0
Tram1Q91V04 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms