Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Mir5126-201ENSMUST00000175513 77 ntBASIC20.97■□□□□ 0.95
StrcQ8VIM6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Gm10052-201ENSMUST00000168019 960 ntBASIC20.97■□□□□ 0.95
StrcQ8VIM6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Gm7729-201ENSMUST00000050143 801 ntBASIC20.97■□□□□ 0.95
StrcQ8VIM6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
StrcQ8VIM6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
StrcQ8VIM6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
StrcQ8VIM6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
StrcQ8VIM6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
StrcQ8VIM6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
StrcQ8VIM6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.96■□□□□ 0.95
StrcQ8VIM6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
StrcQ8VIM6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.95■□□□□ 0.95
StrcQ8VIM6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
StrcQ8VIM6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
StrcQ8VIM6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
StrcQ8VIM6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
StrcQ8VIM6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
StrcQ8VIM6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.95■□□□□ 0.94
StrcQ8VIM6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
StrcQ8VIM6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
StrcQ8VIM6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
StrcQ8VIM6 Gm11336-201ENSMUST00000118168 334 ntBASIC20.94■□□□□ 0.94
StrcQ8VIM6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
StrcQ8VIM6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.94■□□□□ 0.94
StrcQ8VIM6 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.94■□□□□ 0.94
StrcQ8VIM6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
StrcQ8VIM6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
StrcQ8VIM6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
StrcQ8VIM6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
StrcQ8VIM6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
StrcQ8VIM6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
StrcQ8VIM6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
StrcQ8VIM6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
StrcQ8VIM6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.93■□□□□ 0.94
StrcQ8VIM6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
StrcQ8VIM6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.93■□□□□ 0.94
StrcQ8VIM6 Idnk-204ENSMUST00000226010 1898 ntBASIC20.93■□□□□ 0.94
StrcQ8VIM6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
StrcQ8VIM6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
StrcQ8VIM6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
StrcQ8VIM6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.92■□□□□ 0.94
StrcQ8VIM6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.92■□□□□ 0.94
StrcQ8VIM6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
StrcQ8VIM6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
StrcQ8VIM6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
StrcQ8VIM6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
StrcQ8VIM6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.92■□□□□ 0.94
StrcQ8VIM6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
StrcQ8VIM6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
StrcQ8VIM6 Gm4995-201ENSMUST00000117247 432 ntBASIC20.92■□□□□ 0.94
StrcQ8VIM6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.92■□□□□ 0.94
StrcQ8VIM6 Mir5131-201ENSMUST00000175426 93 ntBASIC20.92■□□□□ 0.94
StrcQ8VIM6 Gm27000-201ENSMUST00000182943 842 ntBASIC20.92■□□□□ 0.94
StrcQ8VIM6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
StrcQ8VIM6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
StrcQ8VIM6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
StrcQ8VIM6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
StrcQ8VIM6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
StrcQ8VIM6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.91■□□□□ 0.94
StrcQ8VIM6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
StrcQ8VIM6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
StrcQ8VIM6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.91■□□□□ 0.94
StrcQ8VIM6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.91■□□□□ 0.94
StrcQ8VIM6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.91■□□□□ 0.94
StrcQ8VIM6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
StrcQ8VIM6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
StrcQ8VIM6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms