Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TraipQ8VIG6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TraipQ8VIG6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.6■□□□□ 0.57
TraipQ8VIG6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TraipQ8VIG6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TraipQ8VIG6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TraipQ8VIG6 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.59■□□□□ 0.57
TraipQ8VIG6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.59■□□□□ 0.57
TraipQ8VIG6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.59■□□□□ 0.57
TraipQ8VIG6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.59■□□□□ 0.57
TraipQ8VIG6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TraipQ8VIG6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TraipQ8VIG6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TraipQ8VIG6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TraipQ8VIG6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TraipQ8VIG6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TraipQ8VIG6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TraipQ8VIG6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TraipQ8VIG6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TraipQ8VIG6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TraipQ8VIG6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.58■□□□□ 0.57
TraipQ8VIG6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TraipQ8VIG6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TraipQ8VIG6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TraipQ8VIG6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TraipQ8VIG6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TraipQ8VIG6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TraipQ8VIG6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TraipQ8VIG6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TraipQ8VIG6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TraipQ8VIG6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TraipQ8VIG6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.57■□□□□ 0.56
TraipQ8VIG6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.57■□□□□ 0.56
TraipQ8VIG6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TraipQ8VIG6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.56■□□□□ 0.56
TraipQ8VIG6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TraipQ8VIG6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TraipQ8VIG6 AA414768-201ENSMUST00000121924 1257 ntBASIC18.56■□□□□ 0.56
TraipQ8VIG6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TraipQ8VIG6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TraipQ8VIG6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.56■□□□□ 0.56
TraipQ8VIG6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TraipQ8VIG6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TraipQ8VIG6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TraipQ8VIG6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.56■□□□□ 0.56
TraipQ8VIG6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.56■□□□□ 0.56
TraipQ8VIG6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.56■□□□□ 0.56
TraipQ8VIG6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TraipQ8VIG6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TraipQ8VIG6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TraipQ8VIG6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.55■□□□□ 0.56
TraipQ8VIG6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TraipQ8VIG6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TraipQ8VIG6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TraipQ8VIG6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TraipQ8VIG6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TraipQ8VIG6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TraipQ8VIG6 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.55■□□□□ 0.56
TraipQ8VIG6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.55■□□□□ 0.56
TraipQ8VIG6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TraipQ8VIG6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TraipQ8VIG6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TraipQ8VIG6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TraipQ8VIG6 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.54■□□□□ 0.56
TraipQ8VIG6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TraipQ8VIG6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TraipQ8VIG6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TraipQ8VIG6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TraipQ8VIG6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TraipQ8VIG6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TraipQ8VIG6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TraipQ8VIG6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms