Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Gm12382-201ENSMUST00000122005 922 ntBASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg1dQ8VE91 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Gm5417-201ENSMUST00000079706 384 ntBASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg1dQ8VE91 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg1dQ8VE91 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg1dQ8VE91 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retreg1dQ8VE91 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retreg1dQ8VE91 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retreg1dQ8VE91 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retreg1dQ8VE91 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg1dQ8VE91 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg1dQ8VE91 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg1dQ8VE91 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg1dQ8VE91 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.26■□□□□ 0.35
Retreg1dQ8VE91 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg1dQ8VE91 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.26■□□□□ 0.35
Retreg1dQ8VE91 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg1dQ8VE91 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Retreg1dQ8VE91 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.26■□□□□ 0.35
Retreg1dQ8VE91 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retreg1dQ8VE91 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg1dQ8VE91 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg1dQ8VE91 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg1dQ8VE91 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg1dQ8VE91 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg1dQ8VE91 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg1dQ8VE91 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg1dQ8VE91 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg1dQ8VE91 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg1dQ8VE91 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg1dQ8VE91 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retreg1dQ8VE91 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg1dQ8VE91 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.25■□□□□ 0.35
Retreg1dQ8VE91 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.25■□□□□ 0.35
Retreg1dQ8VE91 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms