Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndc1Q8VCB1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Ndc1Q8VCB1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc1Q8VCB1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc1Q8VCB1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc1Q8VCB1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndc1Q8VCB1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Gm6433-201ENSMUST00000118634 875 ntBASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Gm11643-201ENSMUST00000119578 864 ntBASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Gm3375-201ENSMUST00000203929 796 ntBASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.49■□□□□ 0.23
Ndc1Q8VCB1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ndc1Q8VCB1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc1Q8VCB1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc1Q8VCB1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Ndc1Q8VCB1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.47■□□□□ 0.23
Ndc1Q8VCB1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ndc1Q8VCB1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc1Q8VCB1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc1Q8VCB1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc1Q8VCB1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ndc1Q8VCB1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc1Q8VCB1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc1Q8VCB1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc1Q8VCB1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc1Q8VCB1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc1Q8VCB1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ndc1Q8VCB1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Gm10517-202ENSMUST00000192970 758 ntBASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ndc1Q8VCB1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.45■□□□□ 0.22
Ndc1Q8VCB1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms