Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc9Q8VC31 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc9Q8VC31 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc9Q8VC31 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc9Q8VC31 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc9Q8VC31 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc9Q8VC31 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc9Q8VC31 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc9Q8VC31 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc9Q8VC31 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC21.03■□□□□ 0.96
Ccdc9Q8VC31 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc9Q8VC31 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.03■□□□□ 0.96
Ccdc9Q8VC31 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc9Q8VC31 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ccdc9Q8VC31 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc9Q8VC31 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Ccdc9Q8VC31 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 AC153526.5-201ENSMUST00000218661 2147 ntBASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc9Q8VC31 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc9Q8VC31 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc9Q8VC31 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms