Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Top1mtQ8R4U6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Top1mtQ8R4U6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Gm20760-201ENSMUST00000179197 648 ntBASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Gm43183-201ENSMUST00000200632 547 ntBASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Top1mtQ8R4U6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Top1mtQ8R4U6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Top1mtQ8R4U6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Top1mtQ8R4U6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Top1mtQ8R4U6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Top1mtQ8R4U6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Top1mtQ8R4U6 Gm12382-201ENSMUST00000122005 922 ntBASIC20.89■□□□□ 0.93
Top1mtQ8R4U6 Gm10698-201ENSMUST00000182663 604 ntBASIC20.89■□□□□ 0.93
Top1mtQ8R4U6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Top1mtQ8R4U6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Top1mtQ8R4U6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Top1mtQ8R4U6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Top1mtQ8R4U6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Top1mtQ8R4U6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Top1mtQ8R4U6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Gm15378-201ENSMUST00000121894 207 ntBASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Top1mtQ8R4U6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Top1mtQ8R4U6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Top1mtQ8R4U6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Top1mtQ8R4U6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Top1mtQ8R4U6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Top1mtQ8R4U6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Top1mtQ8R4U6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Top1mtQ8R4U6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms