Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ushbp1Q8R370 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ushbp1Q8R370 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ushbp1Q8R370 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ushbp1Q8R370 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ushbp1Q8R370 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Ushbp1Q8R370 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ushbp1Q8R370 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ushbp1Q8R370 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ushbp1Q8R370 Gm10418-201ENSMUST00000100943 576 ntBASIC19.59■□□□□ 0.73
Ushbp1Q8R370 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Ushbp1Q8R370 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ushbp1Q8R370 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ushbp1Q8R370 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ushbp1Q8R370 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ushbp1Q8R370 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
Ushbp1Q8R370 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Ushbp1Q8R370 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Ushbp1Q8R370 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Ushbp1Q8R370 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ushbp1Q8R370 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.58■□□□□ 0.73
Ushbp1Q8R370 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ushbp1Q8R370 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ushbp1Q8R370 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ushbp1Q8R370 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ushbp1Q8R370 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.58■□□□□ 0.72
Ushbp1Q8R370 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ushbp1Q8R370 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.58■□□□□ 0.72
Ushbp1Q8R370 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ushbp1Q8R370 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ushbp1Q8R370 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ushbp1Q8R370 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ushbp1Q8R370 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ushbp1Q8R370 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ushbp1Q8R370 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ushbp1Q8R370 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ushbp1Q8R370 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ushbp1Q8R370 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ushbp1Q8R370 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ushbp1Q8R370 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ushbp1Q8R370 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
Ushbp1Q8R370 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ushbp1Q8R370 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ushbp1Q8R370 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ushbp1Q8R370 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ushbp1Q8R370 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ushbp1Q8R370 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ushbp1Q8R370 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ushbp1Q8R370 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ushbp1Q8R370 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ushbp1Q8R370 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ushbp1Q8R370 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ushbp1Q8R370 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ushbp1Q8R370 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ushbp1Q8R370 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
Ushbp1Q8R370 Gm43799-201ENSMUST00000201845 579 ntBASIC19.56■□□□□ 0.72
Ushbp1Q8R370 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ushbp1Q8R370 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ushbp1Q8R370 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Ushbp1Q8R370 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ushbp1Q8R370 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ushbp1Q8R370 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ushbp1Q8R370 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Gm6433-201ENSMUST00000118634 875 ntBASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Gm10231-201ENSMUST00000181584 441 ntBASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Gm10175-202ENSMUST00000208752 441 ntBASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ushbp1Q8R370 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.54■□□□□ 0.72
Ushbp1Q8R370 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ushbp1Q8R370 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ushbp1Q8R370 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ushbp1Q8R370 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ushbp1Q8R370 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ushbp1Q8R370 Gm10138-203ENSMUST00000206952 366 ntBASIC19.54■□□□□ 0.72
Ushbp1Q8R370 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.54■□□□□ 0.72
Ushbp1Q8R370 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms