Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfc3Q8R323 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Rfc3Q8R323 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfc3Q8R323 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rfc3Q8R323 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rfc3Q8R323 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rfc3Q8R323 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.11■□□□□ 0.17
Rfc3Q8R323 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.11■□□□□ 0.17
Rfc3Q8R323 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Rfc3Q8R323 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.1■□□□□ 0.17
Rfc3Q8R323 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Rfc3Q8R323 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.1■□□□□ 0.17
Rfc3Q8R323 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.1■□□□□ 0.17
Rfc3Q8R323 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rfc3Q8R323 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rfc3Q8R323 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rfc3Q8R323 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc3Q8R323 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc3Q8R323 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rfc3Q8R323 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc3Q8R323 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc3Q8R323 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc3Q8R323 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.09■□□□□ 0.17
Rfc3Q8R323 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.09■□□□□ 0.17
Rfc3Q8R323 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc3Q8R323 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc3Q8R323 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.09■□□□□ 0.17
Rfc3Q8R323 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.09■□□□□ 0.17
Rfc3Q8R323 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.09■□□□□ 0.17
Rfc3Q8R323 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.09■□□□□ 0.17
Rfc3Q8R323 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc3Q8R323 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc3Q8R323 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rfc3Q8R323 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rfc3Q8R323 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfc3Q8R323 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Rfc3Q8R323 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfc3Q8R323 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfc3Q8R323 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfc3Q8R323 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfc3Q8R323 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rfc3Q8R323 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc3Q8R323 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc3Q8R323 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rfc3Q8R323 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.08■□□□□ 0.16
Rfc3Q8R323 Mir6349-201ENSMUST00000184059 97 ntBASIC16.08■□□□□ 0.16
Rfc3Q8R323 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rfc3Q8R323 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc3Q8R323 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.08■□□□□ 0.16
Rfc3Q8R323 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc3Q8R323 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc3Q8R323 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.08■□□□□ 0.16
Rfc3Q8R323 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.08■□□□□ 0.16
Rfc3Q8R323 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc3Q8R323 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc3Q8R323 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc3Q8R323 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc3Q8R323 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rfc3Q8R323 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc3Q8R323 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rfc3Q8R323 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms