Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx54Q8K4L0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx54Q8K4L0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx54Q8K4L0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx54Q8K4L0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC22.87■■□□□ 1.25
Ddx54Q8K4L0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx54Q8K4L0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Ddx54Q8K4L0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx54Q8K4L0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx54Q8K4L0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx54Q8K4L0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx54Q8K4L0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC22.87■■□□□ 1.25
Ddx54Q8K4L0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx54Q8K4L0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx54Q8K4L0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx54Q8K4L0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx54Q8K4L0 Gm1818-201ENSMUST00000169406 1184 ntBASIC22.86■■□□□ 1.25
Ddx54Q8K4L0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx54Q8K4L0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx54Q8K4L0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx54Q8K4L0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Ddx54Q8K4L0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx54Q8K4L0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx54Q8K4L0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx54Q8K4L0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Ddx54Q8K4L0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx54Q8K4L0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx54Q8K4L0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx54Q8K4L0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx54Q8K4L0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx54Q8K4L0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC22.85■■□□□ 1.25
Ddx54Q8K4L0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx54Q8K4L0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx54Q8K4L0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx54Q8K4L0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC22.85■■□□□ 1.25
Ddx54Q8K4L0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx54Q8K4L0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx54Q8K4L0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC22.84■■□□□ 1.25
Ddx54Q8K4L0 Gm43332-201ENSMUST00000202511 1044 ntBASIC22.84■■□□□ 1.25
Ddx54Q8K4L0 Rps4l-201ENSMUST00000071745 943 ntBASIC22.84■■□□□ 1.25
Ddx54Q8K4L0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx54Q8K4L0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx54Q8K4L0 Gm6190-201ENSMUST00000220683 1374 ntBASIC22.84■■□□□ 1.25
Ddx54Q8K4L0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx54Q8K4L0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx54Q8K4L0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx54Q8K4L0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx54Q8K4L0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Ddx54Q8K4L0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ddx54Q8K4L0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Ddx54Q8K4L0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Ddx54Q8K4L0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Ddx54Q8K4L0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ddx54Q8K4L0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ddx54Q8K4L0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC22.83■■□□□ 1.25
Ddx54Q8K4L0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ddx54Q8K4L0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ddx54Q8K4L0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ddx54Q8K4L0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Ddx54Q8K4L0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx54Q8K4L0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx54Q8K4L0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx54Q8K4L0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx54Q8K4L0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC22.82■■□□□ 1.24
Ddx54Q8K4L0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC22.82■■□□□ 1.24
Ddx54Q8K4L0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC22.82■■□□□ 1.24
Ddx54Q8K4L0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx54Q8K4L0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx54Q8K4L0 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.82■■□□□ 1.24
Ddx54Q8K4L0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx54Q8K4L0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx54Q8K4L0 Gm12644-201ENSMUST00000119935 606 ntBASIC22.81■■□□□ 1.24
Ddx54Q8K4L0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx54Q8K4L0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Ddx54Q8K4L0 Mir5131-201ENSMUST00000175426 93 ntBASIC22.81■■□□□ 1.24
Ddx54Q8K4L0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx54Q8K4L0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Ddx54Q8K4L0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx54Q8K4L0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx54Q8K4L0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC22.81■■□□□ 1.24
Ddx54Q8K4L0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx54Q8K4L0 Gm45906-201ENSMUST00000208911 1430 ntBASIC22.81■■□□□ 1.24
Ddx54Q8K4L0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Ddx54Q8K4L0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx54Q8K4L0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC22.8■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms