Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hist3h2bbQ8CGP0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist3h2bbQ8CGP0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hist3h2bbQ8CGP0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist3h2bbQ8CGP0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hist3h2bbQ8CGP0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist3h2bbQ8CGP0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist3h2bbQ8CGP0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist3h2bbQ8CGP0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist3h2bbQ8CGP0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.32□□□□□ -0.28
Hist3h2bbQ8CGP0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hist3h2bbQ8CGP0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Gm43530-201ENSMUST00000195920 274 ntBASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hist3h2bbQ8CGP0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.29□□□□□ -0.28
Hist3h2bbQ8CGP0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist3h2bbQ8CGP0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist3h2bbQ8CGP0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.29□□□□□ -0.28
Hist3h2bbQ8CGP0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist3h2bbQ8CGP0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist3h2bbQ8CGP0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hist3h2bbQ8CGP0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hist3h2bbQ8CGP0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Hist3h2bbQ8CGP0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms