Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smc2Q8CG48 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Smc2Q8CG48 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc2Q8CG48 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc2Q8CG48 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc2Q8CG48 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc2Q8CG48 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.01■□□□□ 0.79
Smc2Q8CG48 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc2Q8CG48 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc2Q8CG48 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc2Q8CG48 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc2Q8CG48 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc2Q8CG48 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc2Q8CG48 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.01■□□□□ 0.79
Smc2Q8CG48 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Smc2Q8CG48 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smc2Q8CG48 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20■□□□□ 0.79
Smc2Q8CG48 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Smc2Q8CG48 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc2Q8CG48 Gm15375-201ENSMUST00000119510 849 ntBASIC20■□□□□ 0.79
Smc2Q8CG48 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20■□□□□ 0.79
Smc2Q8CG48 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20■□□□□ 0.79
Smc2Q8CG48 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20■□□□□ 0.79
Smc2Q8CG48 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc2Q8CG48 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Smc2Q8CG48 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc2Q8CG48 Gm37820-201ENSMUST00000194021 2147 ntBASIC20■□□□□ 0.79
Smc2Q8CG48 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc2Q8CG48 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Smc2Q8CG48 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc2Q8CG48 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc2Q8CG48 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc2Q8CG48 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc2Q8CG48 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc2Q8CG48 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc2Q8CG48 Gm11249-201ENSMUST00000117071 859 ntBASIC19.99■□□□□ 0.79
Smc2Q8CG48 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc2Q8CG48 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smc2Q8CG48 Mir8112-201ENSMUST00000184382 131 ntBASIC19.99■□□□□ 0.79
Smc2Q8CG48 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc2Q8CG48 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smc2Q8CG48 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc2Q8CG48 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.99■□□□□ 0.79
Smc2Q8CG48 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smc2Q8CG48 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Smc2Q8CG48 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc2Q8CG48 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc2Q8CG48 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Gm12441-201ENSMUST00000121806 588 ntBASIC19.98■□□□□ 0.79
Smc2Q8CG48 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smc2Q8CG48 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smc2Q8CG48 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc2Q8CG48 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc2Q8CG48 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Smc2Q8CG48 Gm13158-201ENSMUST00000122007 736 ntBASIC19.97■□□□□ 0.79
Smc2Q8CG48 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc2Q8CG48 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.97■□□□□ 0.79
Smc2Q8CG48 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.97■□□□□ 0.79
Smc2Q8CG48 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc2Q8CG48 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smc2Q8CG48 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc2Q8CG48 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smc2Q8CG48 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
Smc2Q8CG48 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Smc2Q8CG48 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc2Q8CG48 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc2Q8CG48 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Smc2Q8CG48 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Smc2Q8CG48 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.96■□□□□ 0.79
Smc2Q8CG48 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc2Q8CG48 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc2Q8CG48 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc2Q8CG48 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc2Q8CG48 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Smc2Q8CG48 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smc2Q8CG48 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc2Q8CG48 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smc2Q8CG48 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc2Q8CG48 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
Smc2Q8CG48 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Smc2Q8CG48 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc2Q8CG48 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.95■□□□□ 0.78
Smc2Q8CG48 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.95■□□□□ 0.78
Smc2Q8CG48 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc2Q8CG48 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smc2Q8CG48 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms