Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc38Q8CDN8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc38Q8CDN8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccdc38Q8CDN8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Gm11249-201ENSMUST00000117071 859 ntBASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Gm12896-201ENSMUST00000118430 226 ntBASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Gm11643-201ENSMUST00000119578 864 ntBASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc38Q8CDN8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc38Q8CDN8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc38Q8CDN8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc38Q8CDN8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc38Q8CDN8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc38Q8CDN8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc38Q8CDN8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc38Q8CDN8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.39■□□□□ 0.7
Ccdc38Q8CDN8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Gm15375-201ENSMUST00000119510 849 ntBASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc38Q8CDN8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc38Q8CDN8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ccdc38Q8CDN8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc38Q8CDN8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc38Q8CDN8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc38Q8CDN8 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.38■□□□□ 0.69
Ccdc38Q8CDN8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc38Q8CDN8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc38Q8CDN8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc38Q8CDN8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc38Q8CDN8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc38Q8CDN8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc38Q8CDN8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc38Q8CDN8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.38■□□□□ 0.69
Ccdc38Q8CDN8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.37■□□□□ 0.69
Ccdc38Q8CDN8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms