Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap54Q8C6S9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap54Q8C6S9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap54Q8C6S9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cfap54Q8C6S9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap54Q8C6S9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.77■□□□□ 0.28
Cfap54Q8C6S9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap54Q8C6S9 Mir770-201ENSMUST00000103252 94 ntBASIC16.77■□□□□ 0.28
Cfap54Q8C6S9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cfap54Q8C6S9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.77■□□□□ 0.28
Cfap54Q8C6S9 Gm11355-201ENSMUST00000121120 306 ntBASIC16.77■□□□□ 0.28
Cfap54Q8C6S9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cfap54Q8C6S9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Cfap54Q8C6S9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Cfap54Q8C6S9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.77■□□□□ 0.28
Cfap54Q8C6S9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.77■□□□□ 0.28
Cfap54Q8C6S9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cfap54Q8C6S9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cfap54Q8C6S9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.77■□□□□ 0.27
Cfap54Q8C6S9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Olfr129-201ENSMUST00000122318 993 ntBASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cfap54Q8C6S9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cfap54Q8C6S9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Gm26039-201ENSMUST00000158152 144 ntBASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Gm2651-201ENSMUST00000203560 838 ntBASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
Cfap54Q8C6S9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap54Q8C6S9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap54Q8C6S9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap54Q8C6S9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap54Q8C6S9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap54Q8C6S9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap54Q8C6S9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap54Q8C6S9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap54Q8C6S9 Gm18206-201ENSMUST00000207027 926 ntBASIC16.73■□□□□ 0.27
Cfap54Q8C6S9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cfap54Q8C6S9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap54Q8C6S9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap54Q8C6S9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap54Q8C6S9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cfap54Q8C6S9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Gm13401-201ENSMUST00000117074 291 ntBASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cfap54Q8C6S9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms