Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip4Q8BQP8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip4Q8BQP8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip4Q8BQP8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip4Q8BQP8 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.34■□□□□ 0.69
Rab11fip4Q8BQP8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rab11fip4Q8BQP8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab11fip4Q8BQP8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab11fip4Q8BQP8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab11fip4Q8BQP8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab11fip4Q8BQP8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rab11fip4Q8BQP8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip4Q8BQP8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.33■□□□□ 0.68
Rab11fip4Q8BQP8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.33■□□□□ 0.68
Rab11fip4Q8BQP8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip4Q8BQP8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip4Q8BQP8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip4Q8BQP8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip4Q8BQP8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rab11fip4Q8BQP8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip4Q8BQP8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip4Q8BQP8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip4Q8BQP8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.32■□□□□ 0.68
Rab11fip4Q8BQP8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.32■□□□□ 0.68
Rab11fip4Q8BQP8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Rab11fip4Q8BQP8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rab11fip4Q8BQP8 Gm38285-201ENSMUST00000192928 922 ntBASIC19.32■□□□□ 0.68
Rab11fip4Q8BQP8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip4Q8BQP8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip4Q8BQP8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip4Q8BQP8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip4Q8BQP8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip4Q8BQP8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip4Q8BQP8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab11fip4Q8BQP8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip4Q8BQP8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.31■□□□□ 0.68
Rab11fip4Q8BQP8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip4Q8BQP8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip4Q8BQP8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip4Q8BQP8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip4Q8BQP8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.31■□□□□ 0.68
Rab11fip4Q8BQP8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Rab11fip4Q8BQP8 Gm10138-203ENSMUST00000206952 366 ntBASIC19.31■□□□□ 0.68
Rab11fip4Q8BQP8 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.31■□□□□ 0.68
Rab11fip4Q8BQP8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip4Q8BQP8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip4Q8BQP8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip4Q8BQP8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip4Q8BQP8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab11fip4Q8BQP8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Gm15565-201ENSMUST00000118890 427 ntBASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Gm7977-201ENSMUST00000193787 748 ntBASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rab11fip4Q8BQP8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip4Q8BQP8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip4Q8BQP8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rab11fip4Q8BQP8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.29■□□□□ 0.68
Rab11fip4Q8BQP8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip4Q8BQP8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip4Q8BQP8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rab11fip4Q8BQP8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip4Q8BQP8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rab11fip4Q8BQP8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rab11fip4Q8BQP8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms