Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sfr1Q8BP27 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Mir1199-201ENSMUST00000117015 119 ntBASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sfr1Q8BP27 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.72■□□□□ 0.43
Sfr1Q8BP27 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sfr1Q8BP27 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Sfr1Q8BP27 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sfr1Q8BP27 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Sfr1Q8BP27 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sfr1Q8BP27 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Sfr1Q8BP27 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sfr1Q8BP27 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms