Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ckap4Q8BMK4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ckap4Q8BMK4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Gm37179-201ENSMUST00000194862 823 ntBASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ckap4Q8BMK4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ckap4Q8BMK4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap4Q8BMK4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.53■□□□□ 0.24
Ckap4Q8BMK4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ckap4Q8BMK4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap4Q8BMK4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.53■□□□□ 0.24
Ckap4Q8BMK4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap4Q8BMK4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap4Q8BMK4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap4Q8BMK4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap4Q8BMK4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap4Q8BMK4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Ckap4Q8BMK4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ckap4Q8BMK4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ckap4Q8BMK4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ckap4Q8BMK4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ckap4Q8BMK4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ckap4Q8BMK4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ckap4Q8BMK4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ckap4Q8BMK4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ckap4Q8BMK4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.52■□□□□ 0.24
Ckap4Q8BMK4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Ckap4Q8BMK4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ckap4Q8BMK4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.52■□□□□ 0.24
Ckap4Q8BMK4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ckap4Q8BMK4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ckap4Q8BMK4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ckap4Q8BMK4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ckap4Q8BMK4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ckap4Q8BMK4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms