Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col16a1Q8BLX7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col16a1Q8BLX7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Col16a1Q8BLX7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col16a1Q8BLX7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Col16a1Q8BLX7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Col16a1Q8BLX7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
Col16a1Q8BLX7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Col16a1Q8BLX7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col16a1Q8BLX7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Col16a1Q8BLX7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Col16a1Q8BLX7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col16a1Q8BLX7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col16a1Q8BLX7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Col16a1Q8BLX7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col16a1Q8BLX7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col16a1Q8BLX7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col16a1Q8BLX7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col16a1Q8BLX7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col16a1Q8BLX7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col16a1Q8BLX7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col16a1Q8BLX7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Col16a1Q8BLX7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC23■■□□□ 1.27
Col16a1Q8BLX7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC23■■□□□ 1.27
Col16a1Q8BLX7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC23■■□□□ 1.27
Col16a1Q8BLX7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC23■■□□□ 1.27
Col16a1Q8BLX7 Gm6443-201ENSMUST00000203599 874 ntBASIC23■■□□□ 1.27
Col16a1Q8BLX7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col16a1Q8BLX7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col16a1Q8BLX7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC23■■□□□ 1.27
Col16a1Q8BLX7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC22.99■■□□□ 1.27
Col16a1Q8BLX7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col16a1Q8BLX7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Col16a1Q8BLX7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC22.99■■□□□ 1.27
Col16a1Q8BLX7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC22.99■■□□□ 1.27
Col16a1Q8BLX7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col16a1Q8BLX7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col16a1Q8BLX7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Col16a1Q8BLX7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col16a1Q8BLX7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col16a1Q8BLX7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 Gm28659-201ENSMUST00000188013 759 ntBASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 Gm5867-201ENSMUST00000063197 592 ntBASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col16a1Q8BLX7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 AC124569.2-201ENSMUST00000225998 818 ntBASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Fst-202ENSMUST00000223640 2612 ntBASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Mir8098-201ENSMUST00000184011 137 ntBASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col16a1Q8BLX7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Col16a1Q8BLX7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col16a1Q8BLX7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col16a1Q8BLX7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Col16a1Q8BLX7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Col16a1Q8BLX7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col16a1Q8BLX7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Col16a1Q8BLX7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col16a1Q8BLX7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC22.96■■□□□ 1.27
Col16a1Q8BLX7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col16a1Q8BLX7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col16a1Q8BLX7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Col16a1Q8BLX7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col16a1Q8BLX7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col16a1Q8BLX7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.96■■□□□ 1.27
Col16a1Q8BLX7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.27
Col16a1Q8BLX7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.27
Col16a1Q8BLX7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col16a1Q8BLX7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col16a1Q8BLX7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col16a1Q8BLX7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col16a1Q8BLX7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC22.95■■□□□ 1.26
Col16a1Q8BLX7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC22.95■■□□□ 1.26
Col16a1Q8BLX7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Col16a1Q8BLX7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms