Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim65Q8BFW4 Gm37292-201ENSMUST00000192062 758 ntBASIC18.75■□□□□ 0.59
Trim65Q8BFW4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim65Q8BFW4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trim65Q8BFW4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim65Q8BFW4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim65Q8BFW4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim65Q8BFW4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim65Q8BFW4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim65Q8BFW4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim65Q8BFW4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.74■□□□□ 0.59
Trim65Q8BFW4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim65Q8BFW4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim65Q8BFW4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim65Q8BFW4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim65Q8BFW4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim65Q8BFW4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim65Q8BFW4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim65Q8BFW4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim65Q8BFW4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim65Q8BFW4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim65Q8BFW4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim65Q8BFW4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim65Q8BFW4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim65Q8BFW4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim65Q8BFW4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim65Q8BFW4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim65Q8BFW4 Gm10698-201ENSMUST00000182663 604 ntBASIC18.71■□□□□ 0.59
Trim65Q8BFW4 Gm43183-201ENSMUST00000200632 547 ntBASIC18.71■□□□□ 0.59
Trim65Q8BFW4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim65Q8BFW4 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.71■□□□□ 0.59
Trim65Q8BFW4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim65Q8BFW4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim65Q8BFW4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim65Q8BFW4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim65Q8BFW4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim65Q8BFW4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim65Q8BFW4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim65Q8BFW4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim65Q8BFW4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Gm15378-201ENSMUST00000121894 207 ntBASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Gm12382-201ENSMUST00000122005 922 ntBASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim65Q8BFW4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim65Q8BFW4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim65Q8BFW4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim65Q8BFW4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim65Q8BFW4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim65Q8BFW4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim65Q8BFW4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim65Q8BFW4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trim65Q8BFW4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms