Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Zkscan4-202ENSMUST00000225845 1506 ntBASIC22.56■■□□□ 1.2
Shank2Q80Z38 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Shank2Q80Z38 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Shank2Q80Z38 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC22.56■■□□□ 1.2
Shank2Q80Z38 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC22.56■■□□□ 1.2
Shank2Q80Z38 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Shank2Q80Z38 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Shank2Q80Z38 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Shank2Q80Z38 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Shank2Q80Z38 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Shank2Q80Z38 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC22.56■■□□□ 1.2
Shank2Q80Z38 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shank2Q80Z38 Gm1401-201ENSMUST00000122048 772 ntBASIC22.55■■□□□ 1.2
Shank2Q80Z38 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Shank2Q80Z38 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC22.55■■□□□ 1.2
Shank2Q80Z38 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Shank2Q80Z38 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shank2Q80Z38 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Shank2Q80Z38 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Shank2Q80Z38 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Shank2Q80Z38 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shank2Q80Z38 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shank2Q80Z38 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shank2Q80Z38 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Shank2Q80Z38 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC22.54■■□□□ 1.2
Shank2Q80Z38 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shank2Q80Z38 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Shank2Q80Z38 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Shank2Q80Z38 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Shank2Q80Z38 Gm43231-201ENSMUST00000202960 2258 ntBASIC22.53■■□□□ 1.2
Shank2Q80Z38 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Shank2Q80Z38 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Shank2Q80Z38 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Shank2Q80Z38 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC22.53■■□□□ 1.2
Shank2Q80Z38 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Shank2Q80Z38 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Shank2Q80Z38 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Shank2Q80Z38 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shank2Q80Z38 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shank2Q80Z38 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shank2Q80Z38 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shank2Q80Z38 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Shank2Q80Z38 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shank2Q80Z38 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shank2Q80Z38 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC22.52■■□□□ 1.19
Shank2Q80Z38 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Shank2Q80Z38 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Shank2Q80Z38 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shank2Q80Z38 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shank2Q80Z38 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shank2Q80Z38 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shank2Q80Z38 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shank2Q80Z38 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Shank2Q80Z38 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.51■■□□□ 1.19
Shank2Q80Z38 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Shank2Q80Z38 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC22.51■■□□□ 1.19
Shank2Q80Z38 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC22.51■■□□□ 1.19
Shank2Q80Z38 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC22.51■■□□□ 1.19
Shank2Q80Z38 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Shank2Q80Z38 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Shank2Q80Z38 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shank2Q80Z38 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Shank2Q80Z38 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shank2Q80Z38 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Shank2Q80Z38 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shank2Q80Z38 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Shank2Q80Z38 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC22.5■■□□□ 1.19
Shank2Q80Z38 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Shank2Q80Z38 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shank2Q80Z38 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Shank2Q80Z38 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shank2Q80Z38 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shank2Q80Z38 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shank2Q80Z38 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC22.5■■□□□ 1.19
Shank2Q80Z38 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shank2Q80Z38 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shank2Q80Z38 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Shank2Q80Z38 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Shank2Q80Z38 Gm8000-201ENSMUST00000188378 592 ntBASIC22.49■■□□□ 1.19
Shank2Q80Z38 AC154621.1-201ENSMUST00000226155 1119 ntBASIC22.49■■□□□ 1.19
Shank2Q80Z38 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms