Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk3bQ80YF6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk3bQ80YF6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Gm7514-201ENSMUST00000209475 934 ntBASIC14.8□□□□□ -0.04
Upk3bQ80YF6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk3bQ80YF6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Gm10418-201ENSMUST00000100943 576 ntBASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Gm29791-202ENSMUST00000207888 369 ntBASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk3bQ80YF6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.78□□□□□ -0.04
Upk3bQ80YF6 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.78□□□□□ -0.04
Upk3bQ80YF6 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Gm10493-201ENSMUST00000097270 612 ntBASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Upk3bQ80YF6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Upk3bQ80YF6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Upk3bQ80YF6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms