Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn4bQ7M729 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.02■□□□□ 0.32
Scn4bQ7M729 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Scn4bQ7M729 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn4bQ7M729 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn4bQ7M729 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn4bQ7M729 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn4bQ7M729 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn4bQ7M729 Gm20760-201ENSMUST00000179197 648 ntBASIC17.02■□□□□ 0.32
Scn4bQ7M729 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn4bQ7M729 Mir8112-201ENSMUST00000184382 131 ntBASIC17.02■□□□□ 0.32
Scn4bQ7M729 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn4bQ7M729 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.02■□□□□ 0.32
Scn4bQ7M729 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Scn4bQ7M729 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn4bQ7M729 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn4bQ7M729 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn4bQ7M729 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Scn4bQ7M729 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn4bQ7M729 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.01■□□□□ 0.31
Scn4bQ7M729 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Gm11643-201ENSMUST00000119578 864 ntBASIC17.01■□□□□ 0.31
Scn4bQ7M729 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Gm10653-202ENSMUST00000139570 835 ntBASIC17.01■□□□□ 0.31
Scn4bQ7M729 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn4bQ7M729 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn4bQ7M729 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.01■□□□□ 0.31
Scn4bQ7M729 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Scn4bQ7M729 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn4bQ7M729 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn4bQ7M729 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Scn4bQ7M729 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn4bQ7M729 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn4bQ7M729 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Scn4bQ7M729 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scn4bQ7M729 Gm44878-201ENSMUST00000205812 1295 ntBASIC17■□□□□ 0.31
Scn4bQ7M729 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn4bQ7M729 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Scn4bQ7M729 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn4bQ7M729 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17■□□□□ 0.31
Scn4bQ7M729 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scn4bQ7M729 Gm37519-201ENSMUST00000191687 2210 ntBASIC17■□□□□ 0.31
Scn4bQ7M729 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Scn4bQ7M729 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4bQ7M729 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4bQ7M729 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4bQ7M729 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.98■□□□□ 0.31
Scn4bQ7M729 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4bQ7M729 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4bQ7M729 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4bQ7M729 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Scn4bQ7M729 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4bQ7M729 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4bQ7M729 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Scn4bQ7M729 Gm6576-201ENSMUST00000169678 883 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms