Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.26□□□□□ -0.13
Vma21Q78T54 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Vma21Q78T54 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vma21Q78T54 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vma21Q78T54 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vma21Q78T54 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vma21Q78T54 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vma21Q78T54 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vma21Q78T54 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.26□□□□□ -0.13
Vma21Q78T54 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vma21Q78T54 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vma21Q78T54 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vma21Q78T54 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vma21Q78T54 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.26□□□□□ -0.13
Vma21Q78T54 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.25□□□□□ -0.13
Vma21Q78T54 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.25□□□□□ -0.13
Vma21Q78T54 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.25□□□□□ -0.13
Vma21Q78T54 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Vma21Q78T54 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.25□□□□□ -0.13
Vma21Q78T54 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.25□□□□□ -0.13
Vma21Q78T54 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 Gm6365-201ENSMUST00000054711 744 ntBASIC14.25□□□□□ -0.13
Vma21Q78T54 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Vma21Q78T54 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.25□□□□□ -0.13
Vma21Q78T54 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vma21Q78T54 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vma21Q78T54 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vma21Q78T54 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vma21Q78T54 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vma21Q78T54 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vma21Q78T54 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.24□□□□□ -0.13
Vma21Q78T54 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vma21Q78T54 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vma21Q78T54 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vma21Q78T54 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vma21Q78T54 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.24□□□□□ -0.13
Vma21Q78T54 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vma21Q78T54 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vma21Q78T54 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.24□□□□□ -0.13
Vma21Q78T54 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vma21Q78T54 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.24□□□□□ -0.13
Vma21Q78T54 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vma21Q78T54 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vma21Q78T54 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Vma21Q78T54 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.23□□□□□ -0.13
Vma21Q78T54 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.23□□□□□ -0.13
Vma21Q78T54 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Vma21Q78T54 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Vma21Q78T54 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.23□□□□□ -0.13
Vma21Q78T54 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.23□□□□□ -0.13
Vma21Q78T54 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Vma21Q78T54 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Vma21Q78T54 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Vma21Q78T54 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vma21Q78T54 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vma21Q78T54 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.22□□□□□ -0.13
Vma21Q78T54 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Vma21Q78T54 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vma21Q78T54 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vma21Q78T54 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vma21Q78T54 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vma21Q78T54 Gm10418-201ENSMUST00000100943 576 ntBASIC14.22□□□□□ -0.13
Vma21Q78T54 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Vma21Q78T54 Gm7290-201ENSMUST00000104990 617 ntBASIC14.22□□□□□ -0.13
Vma21Q78T54 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vma21Q78T54 Gm12918-201ENSMUST00000120234 636 ntBASIC14.22□□□□□ -0.13
Vma21Q78T54 Gm15710-201ENSMUST00000121821 636 ntBASIC14.22□□□□□ -0.13
Vma21Q78T54 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms