Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sned1Q70E20 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Sned1Q70E20 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC21.18■□□□□ 0.98
Sned1Q70E20 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sned1Q70E20 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.18■□□□□ 0.98
Sned1Q70E20 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.18■□□□□ 0.98
Sned1Q70E20 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.18■□□□□ 0.98
Sned1Q70E20 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sned1Q70E20 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.18■□□□□ 0.98
Sned1Q70E20 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.18■□□□□ 0.98
Sned1Q70E20 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sned1Q70E20 Gm1818-201ENSMUST00000169406 1184 ntBASIC21.18■□□□□ 0.98
Sned1Q70E20 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sned1Q70E20 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sned1Q70E20 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sned1Q70E20 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sned1Q70E20 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sned1Q70E20 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sned1Q70E20 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.17■□□□□ 0.98
Sned1Q70E20 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sned1Q70E20 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Sned1Q70E20 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.17■□□□□ 0.98
Sned1Q70E20 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sned1Q70E20 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.17■□□□□ 0.98
Sned1Q70E20 Gm11336-201ENSMUST00000118168 334 ntBASIC21.17■□□□□ 0.98
Sned1Q70E20 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC21.17■□□□□ 0.98
Sned1Q70E20 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sned1Q70E20 Gm8000-201ENSMUST00000188378 592 ntBASIC21.17■□□□□ 0.98
Sned1Q70E20 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Sned1Q70E20 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sned1Q70E20 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sned1Q70E20 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.17■□□□□ 0.98
Sned1Q70E20 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sned1Q70E20 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sned1Q70E20 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Sned1Q70E20 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sned1Q70E20 Gm7862-201ENSMUST00000121461 292 ntBASIC21.16■□□□□ 0.98
Sned1Q70E20 Gm6296-201ENSMUST00000222599 943 ntBASIC21.16■□□□□ 0.98
Sned1Q70E20 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Sned1Q70E20 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Sned1Q70E20 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sned1Q70E20 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Sned1Q70E20 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Sned1Q70E20 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sned1Q70E20 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sned1Q70E20 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sned1Q70E20 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC21.15■□□□□ 0.98
Sned1Q70E20 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sned1Q70E20 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Sned1Q70E20 Mir8112-201ENSMUST00000184382 131 ntBASIC21.14■□□□□ 0.98
Sned1Q70E20 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC21.14■□□□□ 0.98
Sned1Q70E20 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sned1Q70E20 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sned1Q70E20 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC21.14■□□□□ 0.98
Sned1Q70E20 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sned1Q70E20 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sned1Q70E20 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sned1Q70E20 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sned1Q70E20 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sned1Q70E20 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sned1Q70E20 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Sned1Q70E20 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC21.13■□□□□ 0.97
Sned1Q70E20 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC21.13■□□□□ 0.97
Sned1Q70E20 Gm12350-201ENSMUST00000121208 462 ntBASIC21.13■□□□□ 0.97
Sned1Q70E20 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC21.13■□□□□ 0.97
Sned1Q70E20 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC21.13■□□□□ 0.97
Sned1Q70E20 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 AC154621.1-201ENSMUST00000226155 1119 ntBASIC21.13■□□□□ 0.97
Sned1Q70E20 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Sned1Q70E20 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
Sned1Q70E20 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sned1Q70E20 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sned1Q70E20 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sned1Q70E20 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sned1Q70E20 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sned1Q70E20 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sned1Q70E20 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sned1Q70E20 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sned1Q70E20 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sned1Q70E20 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Sned1Q70E20 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sned1Q70E20 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Sned1Q70E20 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC21.12■□□□□ 0.97
Sned1Q70E20 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sned1Q70E20 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms