Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Herc4Q6PAV2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Herc4Q6PAV2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Herc4Q6PAV2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Herc4Q6PAV2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Herc4Q6PAV2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.32■□□□□ 0.68
Herc4Q6PAV2 Mir8112-201ENSMUST00000184382 131 ntBASIC19.32■□□□□ 0.68
Herc4Q6PAV2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Herc4Q6PAV2 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.32■□□□□ 0.68
Herc4Q6PAV2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Herc4Q6PAV2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Herc4Q6PAV2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Herc4Q6PAV2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Herc4Q6PAV2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Herc4Q6PAV2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.31■□□□□ 0.68
Herc4Q6PAV2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Herc4Q6PAV2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Herc4Q6PAV2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.31■□□□□ 0.68
Herc4Q6PAV2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.31■□□□□ 0.68
Herc4Q6PAV2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Herc4Q6PAV2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Herc4Q6PAV2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.31■□□□□ 0.68
Herc4Q6PAV2 Gm12382-201ENSMUST00000122005 922 ntBASIC19.31■□□□□ 0.68
Herc4Q6PAV2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Herc4Q6PAV2 Gm8520-201ENSMUST00000186517 868 ntBASIC19.31■□□□□ 0.68
Herc4Q6PAV2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Herc4Q6PAV2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Herc4Q6PAV2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Herc4Q6PAV2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Herc4Q6PAV2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Herc4Q6PAV2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Herc4Q6PAV2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Herc4Q6PAV2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Herc4Q6PAV2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Herc4Q6PAV2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Herc4Q6PAV2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Herc4Q6PAV2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.3■□□□□ 0.68
Herc4Q6PAV2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Herc4Q6PAV2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Herc4Q6PAV2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Herc4Q6PAV2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Herc4Q6PAV2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Herc4Q6PAV2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Herc4Q6PAV2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Herc4Q6PAV2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Herc4Q6PAV2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Herc4Q6PAV2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.29■□□□□ 0.68
Herc4Q6PAV2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Herc4Q6PAV2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.29■□□□□ 0.68
Herc4Q6PAV2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Herc4Q6PAV2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Herc4Q6PAV2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.29■□□□□ 0.68
Herc4Q6PAV2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Herc4Q6PAV2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Herc4Q6PAV2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Herc4Q6PAV2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Herc4Q6PAV2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Herc4Q6PAV2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Herc4Q6PAV2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Herc4Q6PAV2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Herc4Q6PAV2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Herc4Q6PAV2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Herc4Q6PAV2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Herc4Q6PAV2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Herc4Q6PAV2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Herc4Q6PAV2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Herc4Q6PAV2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Herc4Q6PAV2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Herc4Q6PAV2 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.27■□□□□ 0.68
Herc4Q6PAV2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Herc4Q6PAV2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Herc4Q6PAV2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Herc4Q6PAV2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.27■□□□□ 0.68
Herc4Q6PAV2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.27■□□□□ 0.68
Herc4Q6PAV2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Herc4Q6PAV2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Herc4Q6PAV2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Herc4Q6PAV2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Herc4Q6PAV2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Herc4Q6PAV2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Herc4Q6PAV2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Herc4Q6PAV2 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.27■□□□□ 0.67
Herc4Q6PAV2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Herc4Q6PAV2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Herc4Q6PAV2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Herc4Q6PAV2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Herc4Q6PAV2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Herc4Q6PAV2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Herc4Q6PAV2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Herc4Q6PAV2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Herc4Q6PAV2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Herc4Q6PAV2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Herc4Q6PAV2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Herc4Q6PAV2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Herc4Q6PAV2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Herc4Q6PAV2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Herc4Q6PAV2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.26■□□□□ 0.67
Herc4Q6PAV2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Herc4Q6PAV2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Herc4Q6PAV2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 125 ms