Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.74■□□□□ 0.91
Best3Q6H1V1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Best3Q6H1V1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Best3Q6H1V1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Best3Q6H1V1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.74■□□□□ 0.91
Best3Q6H1V1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Best3Q6H1V1 Olfr129-201ENSMUST00000122318 993 ntBASIC20.74■□□□□ 0.91
Best3Q6H1V1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Best3Q6H1V1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Best3Q6H1V1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Best3Q6H1V1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Best3Q6H1V1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Best3Q6H1V1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Best3Q6H1V1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Best3Q6H1V1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Best3Q6H1V1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Best3Q6H1V1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Best3Q6H1V1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Best3Q6H1V1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Best3Q6H1V1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.73■□□□□ 0.91
Best3Q6H1V1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Best3Q6H1V1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Best3Q6H1V1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Best3Q6H1V1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Best3Q6H1V1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
Best3Q6H1V1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Best3Q6H1V1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.73■□□□□ 0.91
Best3Q6H1V1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.73■□□□□ 0.91
Best3Q6H1V1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.73■□□□□ 0.91
Best3Q6H1V1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Best3Q6H1V1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Best3Q6H1V1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Best3Q6H1V1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Best3Q6H1V1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Best3Q6H1V1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Best3Q6H1V1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Best3Q6H1V1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.72■□□□□ 0.91
Best3Q6H1V1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.72■□□□□ 0.91
Best3Q6H1V1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Best3Q6H1V1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Best3Q6H1V1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Best3Q6H1V1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Best3Q6H1V1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Best3Q6H1V1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Best3Q6H1V1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Best3Q6H1V1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Best3Q6H1V1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Best3Q6H1V1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Best3Q6H1V1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Best3Q6H1V1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Best3Q6H1V1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Best3Q6H1V1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Best3Q6H1V1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Best3Q6H1V1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Best3Q6H1V1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Best3Q6H1V1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Best3Q6H1V1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.7■□□□□ 0.9
Best3Q6H1V1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.7■□□□□ 0.9
Best3Q6H1V1 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.7■□□□□ 0.9
Best3Q6H1V1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Best3Q6H1V1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Best3Q6H1V1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Best3Q6H1V1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Best3Q6H1V1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Best3Q6H1V1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Best3Q6H1V1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Best3Q6H1V1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Best3Q6H1V1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Best3Q6H1V1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Best3Q6H1V1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Best3Q6H1V1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Best3Q6H1V1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Best3Q6H1V1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Best3Q6H1V1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Best3Q6H1V1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Best3Q6H1V1 Gm15794-201ENSMUST00000120182 631 ntBASIC20.69■□□□□ 0.9
Best3Q6H1V1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Best3Q6H1V1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.69■□□□□ 0.9
Best3Q6H1V1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Best3Q6H1V1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Best3Q6H1V1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Best3Q6H1V1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms