Protein–RNA interactions for Protein: Q62401

Ccl12, C-C motif chemokine 12, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl12Q62401 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ccl12Q62401 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccl12Q62401 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 Gm5643-201ENSMUST00000117081 966 ntBASIC13.97□□□□□ -0.17
Ccl12Q62401 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 Gm10138-203ENSMUST00000206952 366 ntBASIC13.97□□□□□ -0.17
Ccl12Q62401 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.97□□□□□ -0.17
Ccl12Q62401 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.97□□□□□ -0.17
Ccl12Q62401 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccl12Q62401 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
Ccl12Q62401 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccl12Q62401 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl12Q62401 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ccl12Q62401 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl12Q62401 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl12Q62401 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Ccl12Q62401 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl12Q62401 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ccl12Q62401 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl12Q62401 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Ccl12Q62401 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl12Q62401 Gm22240-201ENSMUST00000175225 82 ntBASIC13.96□□□□□ -0.17
Ccl12Q62401 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl12Q62401 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Ccl12Q62401 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl12Q62401 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccl12Q62401 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl12Q62401 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl12Q62401 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl12Q62401 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccl12Q62401 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccl12Q62401 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccl12Q62401 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.95□□□□□ -0.18
Ccl12Q62401 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.95□□□□□ -0.18
Ccl12Q62401 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.95□□□□□ -0.18
Ccl12Q62401 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccl12Q62401 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.95□□□□□ -0.18
Ccl12Q62401 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.95□□□□□ -0.18
Ccl12Q62401 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccl12Q62401 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccl12Q62401 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.95□□□□□ -0.18
Ccl12Q62401 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ccl12Q62401 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccl12Q62401 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.94□□□□□ -0.18
Ccl12Q62401 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccl12Q62401 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Haglr-201ENSMUST00000100000 2085 ntBASIC13.94□□□□□ -0.18
Ccl12Q62401 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccl12Q62401 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ccl12Q62401 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl12Q62401 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl12Q62401 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl12Q62401 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ccl12Q62401 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl12Q62401 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms