Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scn9aQ62205 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.66■□□□□ 0.9
Scn9aQ62205 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn9aQ62205 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.66■□□□□ 0.9
Scn9aQ62205 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Scn9aQ62205 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn9aQ62205 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Scn9aQ62205 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.65■□□□□ 0.9
Scn9aQ62205 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.65■□□□□ 0.9
Scn9aQ62205 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn9aQ62205 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Scn9aQ62205 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.65■□□□□ 0.9
Scn9aQ62205 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Scn9aQ62205 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn9aQ62205 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scn9aQ62205 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.65■□□□□ 0.9
Scn9aQ62205 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scn9aQ62205 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scn9aQ62205 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Scn9aQ62205 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn9aQ62205 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Scn9aQ62205 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.64■□□□□ 0.89
Scn9aQ62205 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Scn9aQ62205 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn9aQ62205 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn9aQ62205 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scn9aQ62205 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.63■□□□□ 0.89
Scn9aQ62205 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn9aQ62205 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scn9aQ62205 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn9aQ62205 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scn9aQ62205 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn9aQ62205 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn9aQ62205 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn9aQ62205 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn9aQ62205 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.62■□□□□ 0.89
Scn9aQ62205 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn9aQ62205 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Scn9aQ62205 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn9aQ62205 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Scn9aQ62205 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Scn9aQ62205 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn9aQ62205 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scn9aQ62205 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scn9aQ62205 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scn9aQ62205 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scn9aQ62205 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scn9aQ62205 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.61■□□□□ 0.89
Scn9aQ62205 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn9aQ62205 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn9aQ62205 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scn9aQ62205 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.61■□□□□ 0.89
Scn9aQ62205 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.61■□□□□ 0.89
Scn9aQ62205 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.61■□□□□ 0.89
Scn9aQ62205 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Scn9aQ62205 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scn9aQ62205 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn9aQ62205 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn9aQ62205 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn9aQ62205 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scn9aQ62205 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.6■□□□□ 0.89
Scn9aQ62205 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scn9aQ62205 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn9aQ62205 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn9aQ62205 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.59■□□□□ 0.89
Scn9aQ62205 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.59■□□□□ 0.89
Scn9aQ62205 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.59■□□□□ 0.89
Scn9aQ62205 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.59■□□□□ 0.89
Scn9aQ62205 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn9aQ62205 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.59■□□□□ 0.89
Scn9aQ62205 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.59■□□□□ 0.89
Scn9aQ62205 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn9aQ62205 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn9aQ62205 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.59■□□□□ 0.89
Scn9aQ62205 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn9aQ62205 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn9aQ62205 Fst-202ENSMUST00000223640 2612 ntBASIC20.59■□□□□ 0.89
Scn9aQ62205 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Scn9aQ62205 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn9aQ62205 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scn9aQ62205 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn9aQ62205 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scn9aQ62205 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn9aQ62205 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn9aQ62205 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scn9aQ62205 Gm12895-201ENSMUST00000122214 226 ntBASIC20.58■□□□□ 0.89
Scn9aQ62205 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn9aQ62205 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Scn9aQ62205 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scn9aQ62205 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn9aQ62205 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scn9aQ62205 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn9aQ62205 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn9aQ62205 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn9aQ62205 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Scn9aQ62205 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Scn9aQ62205 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Scn9aQ62205 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.57■□□□□ 0.88
Scn9aQ62205 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.57■□□□□ 0.88
Scn9aQ62205 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms