Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdf4Q61112 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdf4Q61112 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdf4Q61112 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdf4Q61112 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdf4Q61112 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdf4Q61112 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sdf4Q61112 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sdf4Q61112 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdf4Q61112 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdf4Q61112 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdf4Q61112 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdf4Q61112 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdf4Q61112 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sdf4Q61112 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.74■□□□□ 0.43
Sdf4Q61112 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sdf4Q61112 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sdf4Q61112 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.74■□□□□ 0.43
Sdf4Q61112 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdf4Q61112 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdf4Q61112 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdf4Q61112 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.74■□□□□ 0.43
Sdf4Q61112 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sdf4Q61112 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sdf4Q61112 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdf4Q61112 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sdf4Q61112 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sdf4Q61112 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdf4Q61112 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Sdf4Q61112 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdf4Q61112 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sdf4Q61112 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdf4Q61112 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sdf4Q61112 Mir8112-201ENSMUST00000184382 131 ntBASIC17.73■□□□□ 0.43
Sdf4Q61112 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Sdf4Q61112 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdf4Q61112 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Sdf4Q61112 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sdf4Q61112 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdf4Q61112 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdf4Q61112 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdf4Q61112 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.72■□□□□ 0.43
Sdf4Q61112 Gm37292-201ENSMUST00000192062 758 ntBASIC17.72■□□□□ 0.43
Sdf4Q61112 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdf4Q61112 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdf4Q61112 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sdf4Q61112 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sdf4Q61112 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Sdf4Q61112 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sdf4Q61112 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdf4Q61112 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Sdf4Q61112 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.72■□□□□ 0.43
Sdf4Q61112 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdf4Q61112 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdf4Q61112 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sdf4Q61112 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sdf4Q61112 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sdf4Q61112 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdf4Q61112 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdf4Q61112 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
Sdf4Q61112 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdf4Q61112 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sdf4Q61112 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sdf4Q61112 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdf4Q61112 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdf4Q61112 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sdf4Q61112 Gm27011-201ENSMUST00000182352 972 ntBASIC17.71■□□□□ 0.43
Sdf4Q61112 Gm10698-201ENSMUST00000182663 604 ntBASIC17.71■□□□□ 0.43
Sdf4Q61112 Gm43183-201ENSMUST00000200632 547 ntBASIC17.71■□□□□ 0.43
Sdf4Q61112 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.71■□□□□ 0.43
Sdf4Q61112 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdf4Q61112 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sdf4Q61112 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdf4Q61112 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Sdf4Q61112 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdf4Q61112 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdf4Q61112 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.7■□□□□ 0.42
Sdf4Q61112 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdf4Q61112 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.7■□□□□ 0.42
Sdf4Q61112 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sdf4Q61112 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sdf4Q61112 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.7■□□□□ 0.42
Sdf4Q61112 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdf4Q61112 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdf4Q61112 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Sdf4Q61112 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sdf4Q61112 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdf4Q61112 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdf4Q61112 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdf4Q61112 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdf4Q61112 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Sdf4Q61112 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdf4Q61112 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdf4Q61112 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdf4Q61112 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.69■□□□□ 0.42
Sdf4Q61112 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdf4Q61112 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.69■□□□□ 0.42
Sdf4Q61112 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sdf4Q61112 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdf4Q61112 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms