Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Mir7071-201ENSMUST00000184847 69 ntBASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Gm3375-201ENSMUST00000203929 796 ntBASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfaip3Q60769 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfaip3Q60769 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Gm15565-201ENSMUST00000118890 427 ntBASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tnfaip3Q60769 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Gm30025-201ENSMUST00000218555 728 ntBASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfaip3Q60769 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfaip3Q60769 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfaip3Q60769 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfaip3Q60769 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfaip3Q60769 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfaip3Q60769 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfaip3Q60769 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfaip3Q60769 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfaip3Q60769 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tnfaip3Q60769 Gm12085-201ENSMUST00000119263 940 ntBASIC16.38■□□□□ 0.21
Tnfaip3Q60769 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.38■□□□□ 0.21
Tnfaip3Q60769 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfaip3Q60769 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfaip3Q60769 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.38■□□□□ 0.21
Tnfaip3Q60769 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.38■□□□□ 0.21
Tnfaip3Q60769 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfaip3Q60769 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms