Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ClpbQ60649 Gm6576-201ENSMUST00000169678 883 ntBASIC16.75■□□□□ 0.27
ClpbQ60649 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.75■□□□□ 0.27
ClpbQ60649 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ClpbQ60649 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClpbQ60649 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ClpbQ60649 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClpbQ60649 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.75■□□□□ 0.27
ClpbQ60649 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClpbQ60649 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClpbQ60649 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClpbQ60649 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ClpbQ60649 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClpbQ60649 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.74■□□□□ 0.27
ClpbQ60649 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClpbQ60649 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClpbQ60649 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClpbQ60649 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClpbQ60649 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.74■□□□□ 0.27
ClpbQ60649 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ClpbQ60649 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClpbQ60649 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClpbQ60649 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ClpbQ60649 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.74■□□□□ 0.27
ClpbQ60649 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.74■□□□□ 0.27
ClpbQ60649 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.74■□□□□ 0.27
ClpbQ60649 Gm10252-201ENSMUST00000209541 832 ntBASIC16.74■□□□□ 0.27
ClpbQ60649 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ClpbQ60649 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.74■□□□□ 0.27
ClpbQ60649 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClpbQ60649 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClpbQ60649 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClpbQ60649 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClpbQ60649 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClpbQ60649 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ClpbQ60649 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClpbQ60649 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ClpbQ60649 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ClpbQ60649 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.73■□□□□ 0.27
ClpbQ60649 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ClpbQ60649 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ClpbQ60649 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ClpbQ60649 Gm15375-201ENSMUST00000119510 849 ntBASIC16.73■□□□□ 0.27
ClpbQ60649 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ClpbQ60649 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ClpbQ60649 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ClpbQ60649 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ClpbQ60649 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ClpbQ60649 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ClpbQ60649 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClpbQ60649 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.72■□□□□ 0.27
ClpbQ60649 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClpbQ60649 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClpbQ60649 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClpbQ60649 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClpbQ60649 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.72■□□□□ 0.27
ClpbQ60649 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClpbQ60649 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ClpbQ60649 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClpbQ60649 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClpbQ60649 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ClpbQ60649 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.72■□□□□ 0.27
ClpbQ60649 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClpbQ60649 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClpbQ60649 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClpbQ60649 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ClpbQ60649 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ClpbQ60649 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClpbQ60649 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClpbQ60649 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClpbQ60649 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClpbQ60649 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ClpbQ60649 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClpbQ60649 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ClpbQ60649 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.71■□□□□ 0.27
ClpbQ60649 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.71■□□□□ 0.27
ClpbQ60649 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ClpbQ60649 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.71■□□□□ 0.27
ClpbQ60649 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ClpbQ60649 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
ClpbQ60649 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
ClpbQ60649 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClpbQ60649 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.71■□□□□ 0.27
ClpbQ60649 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClpbQ60649 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClpbQ60649 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClpbQ60649 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ClpbQ60649 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
ClpbQ60649 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ClpbQ60649 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClpbQ60649 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClpbQ60649 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ClpbQ60649 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.7■□□□□ 0.26
ClpbQ60649 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClpbQ60649 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ClpbQ60649 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ClpbQ60649 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.7■□□□□ 0.26
ClpbQ60649 Mir6349-201ENSMUST00000184059 97 ntBASIC16.7■□□□□ 0.26
ClpbQ60649 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.7■□□□□ 0.26
ClpbQ60649 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms