Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Gm7514-201ENSMUST00000209475 934 ntBASIC16.68■□□□□ 0.26
Nr1h4Q60641 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.68■□□□□ 0.26
Nr1h4Q60641 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nr1h4Q60641 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.67■□□□□ 0.26
Nr1h4Q60641 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Nr1h4Q60641 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nr1h4Q60641 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1h4Q60641 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nr1h4Q60641 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1h4Q60641 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Nr1h4Q60641 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1h4Q60641 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1h4Q60641 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.67■□□□□ 0.26
Nr1h4Q60641 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1h4Q60641 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nr1h4Q60641 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1h4Q60641 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nr1h4Q60641 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.67■□□□□ 0.26
Nr1h4Q60641 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1h4Q60641 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1h4Q60641 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.66■□□□□ 0.26
Nr1h4Q60641 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Nr1h4Q60641 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h4Q60641 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h4Q60641 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h4Q60641 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h4Q60641 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h4Q60641 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.65■□□□□ 0.26
Nr1h4Q60641 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h4Q60641 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h4Q60641 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nr1h4Q60641 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h4Q60641 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Nr1h4Q60641 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h4Q60641 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nr1h4Q60641 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h4Q60641 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1h4Q60641 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.65■□□□□ 0.26
Nr1h4Q60641 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.64■□□□□ 0.26
Nr1h4Q60641 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.64■□□□□ 0.26
Nr1h4Q60641 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.64■□□□□ 0.25
Nr1h4Q60641 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h4Q60641 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1h4Q60641 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h4Q60641 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h4Q60641 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h4Q60641 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h4Q60641 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h4Q60641 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h4Q60641 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h4Q60641 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h4Q60641 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h4Q60641 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nr1h4Q60641 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h4Q60641 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h4Q60641 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1h4Q60641 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms