Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Gm12085-201ENSMUST00000119263 940 ntBASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Gm27463-201ENSMUST00000183569 57 ntBASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav2Q5R1I9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav2Q5R1I9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Gm13401-201ENSMUST00000117074 291 ntBASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Gm9987-201ENSMUST00000069768 567 ntBASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav2Q5R1I9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Gm38027-201ENSMUST00000192315 235 ntBASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav2Q5R1I9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms