Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Gm16401-202ENSMUST00000197463 2074 ntBASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav3-1Q5R1I8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav3-1Q5R1I8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-1Q5R1I8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-1Q5R1I8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.51
Trav3-1Q5R1I8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-1Q5R1I8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Gm9397-201ENSMUST00000200125 605 ntBASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-1Q5R1I8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-1Q5R1I8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms