Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5d-4Q5R1F6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav5d-4Q5R1F6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5d-4Q5R1F6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.04■□□□□ -0
Trav5d-4Q5R1F6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.04■□□□□ -0
Trav5d-4Q5R1F6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.04■□□□□ -0
Trav5d-4Q5R1F6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5d-4Q5R1F6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5d-4Q5R1F6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav5d-4Q5R1F6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5d-4Q5R1F6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav5d-4Q5R1F6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5d-4Q5R1F6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5d-4Q5R1F6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5d-4Q5R1F6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5d-4Q5R1F6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Gm11249-201ENSMUST00000117071 859 ntBASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav5d-4Q5R1F6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav5d-4Q5R1F6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav5d-4Q5R1F6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.02■□□□□ -0
Trav5d-4Q5R1F6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav5d-4Q5R1F6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav5d-4Q5R1F6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav5d-4Q5R1F6 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.02■□□□□ -0
Trav5d-4Q5R1F6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav5d-4Q5R1F6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav5d-4Q5R1F6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Trav5d-4Q5R1F6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav5d-4Q5R1F6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav5d-4Q5R1F6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav5d-4Q5R1F6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav5d-4Q5R1F6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav5d-4Q5R1F6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav5d-4Q5R1F6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav5d-4Q5R1F6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav5d-4Q5R1F6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Gm10418-201ENSMUST00000100943 576 ntBASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Gm10138-203ENSMUST00000206952 366 ntBASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5d-4Q5R1F6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 Gm12441-201ENSMUST00000121806 588 ntBASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 Gm27275-201ENSMUST00000184318 272 ntBASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 Gm37519-201ENSMUST00000191687 2210 ntBASIC15□□□□□ -0.01
Trav5d-4Q5R1F6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav5d-4Q5R1F6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms